monailabel.datastore.dicom module¶
- class monailabel.datastore.dicom.DICOMWebDatastore(client, cache_path=None)[source]¶
Bases:
monailabel.datastore.local.LocalDatastoreCreates a LocalDataset object
Parameters:
- datastore_path: str
a string to the directory tree of the desired dataset
- datastore_config: str
optional file name of the dataset configuration file (by default dataset.json)
- datalist(full_path=True)[source]¶
Return a dictionary of image and label pairs corresponding to the ‘image’ and ‘label’ keys respectively
- Return type
List[Dict[str,str]]- Returns
the {‘label’: image, ‘label’: label} pairs for training
- get_image_uri(image_id)[source]¶
Retrieve image uri based on image id
- Parameters
image_id (
str) – the desired image’s id- Return type
str- Returns
return the image uri
- get_label_uri(label_id, label_tag, image_id='')[source]¶
Retrieve label uri based on image id
- Parameters
label_id (
str) – the desired label’s idlabel_tag (
str) – the matching label’s tag
- Return type
str- Returns
return the label uri
- get_labeled_images()[source]¶
Get all images that have a corresponding label
- Return type
List[str]- Returns
list of image ids List[str]
- get_unlabeled_images()[source]¶
Get all images that have no corresponding label
- Return type
List[str]- Returns
list of image ids List[str]
- list_images()[source]¶
Return list of image ids available in the datastore
- Return type
List[str]- Returns
list of image ids List[str]
- name()[source]¶
Dataset name (if one is assigned)
- Returns
Dataset name as string
- Return type
name (str)
- save_label(image_id, label_filename, label_tag, label_info, label_id='')[source]¶
Save a label for the given image id and return the newly saved label’s id
- Parameters
image_id (
str) – the image id for the labellabel_filename (
str) – the path to the label filelabel_tag (
str) – the tag for the labellabel_info (
Dict[str,Any]) – additional info for the label
- Return type
str- Returns
the label id for the given label filename