:github_url: https://github.com/Project-MONAI/MONAI .. _networks: Network architectures ===================== Blocks ------ .. automodule:: monai.networks.blocks .. currentmodule:: monai.networks.blocks `ADN` ~~~~~ .. autoclass:: ADN :members: `Convolution` ~~~~~~~~~~~~~ .. autoclass:: Convolution :members: `CRF` ~~~~~ .. autoclass:: CRF :members: `ResidualUnit` ~~~~~~~~~~~~~~ .. autoclass:: ResidualUnit :members: `Swish` ~~~~~~~ .. autoclass:: Swish :members: `MemoryEfficientSwish` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: MemoryEfficientSwish :members: `FPN` ~~~~~ .. autoclass:: ExtraFPNBlock :members: .. autoclass:: FeaturePyramidNetwork :members: .. autoclass:: LastLevelMaxPool :members: .. autoclass:: LastLevelP6P7 :members: .. autoclass:: BackboneWithFPN :members: `Mish` ~~~~~~ .. autoclass:: Mish :members: `GEGLU` ~~~~~~~ .. autoclass:: GEGLU :members: `GCN Module` ~~~~~~~~~~~~ .. autoclass:: GCN :members: `Refinement Module` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: Refine :members: `FCN Module` ~~~~~~~~~~~~ .. autoclass:: FCN :members: `Multi-Channel FCN Module` ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: MCFCN :members: `Dynamic-Unet Block` ~~~~~~~~~~~~~~~~~~~~ .. autoclass:: UnetResBlock :members: .. autoclass:: UnetBasicBlock :members: .. autoclass:: UnetUpBlock :members: .. autoclass:: UnetOutBlock :members: `DenseBlock` ~~~~~~~~~~~~~ .. autoclass:: DenseBlock :members: `SegResnet Block` ~~~~~~~~~~~~~~~~~ .. autoclass:: ResBlock :members: `SABlock Block` ~~~~~~~~~~~~~~~ .. autoclass:: SABlock :members: `Squeeze-and-Excitation` ~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: ChannelSELayer :members: `Transformer Block` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: TransformerBlock :members: `UNETR Block` ~~~~~~~~~~~~~ .. autoclass:: UnetrBasicBlock :members: .. autoclass:: UnetrUpBlock :members: .. autoclass:: UnetrPrUpBlock :members: `Residual Squeeze-and-Excitation` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: ResidualSELayer :members: `Squeeze-and-Excitation Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SEBlock :members: `Squeeze-and-Excitation Bottleneck` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SEBottleneck :members: `Squeeze-and-Excitation Resnet Bottleneck` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SEResNetBottleneck :members: `Squeeze-and-Excitation ResNeXt Bottleneck` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SEResNeXtBottleneck :members: `Simple ASPP` ~~~~~~~~~~~~~ .. autoclass:: SimpleASPP :members: `MaxAvgPooling` ~~~~~~~~~~~~~~~ .. autoclass:: MaxAvgPool :members: `Upsampling` ~~~~~~~~~~~~ .. autoclass:: UpSample :members: .. autoclass:: Upsample .. autoclass:: SubpixelUpsample :members: .. autoclass:: Subpixelupsample .. autoclass:: SubpixelUpSample `Registration Residual Conv Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: RegistrationResidualConvBlock :members: `Registration Down Sample Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: RegistrationDownSampleBlock :members: `Registration Extraction Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: RegistrationExtractionBlock :members: `LocalNet DownSample Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: LocalNetDownSampleBlock :members: `LocalNet UpSample Block` ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: LocalNetUpSampleBlock :members: `LocalNet Feature Extractor Block` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: LocalNetFeatureExtractorBlock :members: `MLP Block` ~~~~~~~~~~~ .. autoclass:: MLPBlock :members: `Patch Embedding Block` ~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: PatchEmbeddingBlock :members: `FactorizedIncreaseBlock` ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: FactorizedIncreaseBlock :members: `FactorizedReduceBlock` ~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: FactorizedReduceBlock :members: `P3DActiConvNormBlock` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: P3DActiConvNormBlock :members: `ActiConvNormBlock` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: ActiConvNormBlock :members: `Warp` ~~~~~~ .. autoclass:: Warp :members: `DVF2DDF` ~~~~~~~~~ .. autoclass:: DVF2DDF :members: `VarNetBlock` ~~~~~~~~~~~~~ .. autoclass:: monai.apps.reconstruction.networks.blocks.varnetblock.VarNetBlock :members: N-Dim Fourier Transform ~~~~~~~~~~~~~~~~~~~~~~~~ .. automodule:: monai.networks.blocks.fft_utils_t .. autofunction:: monai.networks.blocks.fft_utils_t.fftn_centered_t .. autofunction:: monai.networks.blocks.fft_utils_t.ifftn_centered_t .. autofunction:: monai.networks.blocks.fft_utils_t.roll .. autofunction:: monai.networks.blocks.fft_utils_t.roll_1d .. autofunction:: monai.networks.blocks.fft_utils_t.fftshift .. autofunction:: monai.networks.blocks.fft_utils_t.ifftshift Layers ------ `Factories` ~~~~~~~~~~~ .. automodule:: monai.networks.layers.factories .. autoclass:: monai.networks.layers.LayerFactory :members: .. currentmodule:: monai.networks.layers `split_args` ~~~~~~~~~~~~ .. autofunction:: monai.networks.layers.split_args `Dropout` ~~~~~~~~~ .. automodule:: monai.networks.layers.Dropout :members: `Act` ~~~~~ .. automodule:: monai.networks.layers.Act :members: `Norm` ~~~~~~ .. automodule:: monai.networks.layers.Norm :members: `Conv` ~~~~~~ .. automodule:: monai.networks.layers.Conv :members: `Pad` ~~~~~ .. automodule:: monai.networks.layers.Pad :members: `Pool` ~~~~~~ .. automodule:: monai.networks.layers.Pool :members: .. currentmodule:: monai.networks.layers `ChannelPad` ~~~~~~~~~~~~ .. autoclass:: ChannelPad :members: `SkipConnection` ~~~~~~~~~~~~~~~~ .. autoclass:: SkipConnection :members: `Flatten` ~~~~~~~~~ .. autoclass:: Flatten :members: `Reshape` ~~~~~~~~~ .. autoclass:: Reshape :members: `separable_filtering` ~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: separable_filtering `apply_filter` ~~~~~~~~~~~~~~ .. autofunction:: apply_filter `GaussianFilter` ~~~~~~~~~~~~~~~~ .. autoclass:: GaussianFilter :members: `MedianFilter` ~~~~~~~~~~~~~~ .. autoclass:: MedianFilter :members: `median_filter` ~~~~~~~~~~~~~~~ .. autoclass:: median_filter :members: `BilateralFilter` ~~~~~~~~~~~~~~~~~ .. autoclass:: BilateralFilter :members: `TrainableBilateralFilter` ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TrainableBilateralFilter :members: `TrainableJointBilateralFilter` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TrainableJointBilateralFilter :members: `PHLFilter` ~~~~~~~~~~~ .. autoclass:: PHLFilter `GaussianMixtureModel` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: GaussianMixtureModel `SavitzkyGolayFilter` ~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SavitzkyGolayFilter :members: `HilbertTransform` ~~~~~~~~~~~~~~~~~~ .. autoclass:: HilbertTransform :members: `Affine Transform` ~~~~~~~~~~~~~~~~~~ .. autoclass:: monai.networks.layers.AffineTransform :members: `grid_pull` ~~~~~~~~~~~ .. autofunction:: monai.networks.layers.grid_pull `grid_push` ~~~~~~~~~~~ .. autofunction:: monai.networks.layers.grid_push `grid_count` ~~~~~~~~~~~~ .. autofunction:: monai.networks.layers.grid_count `grid_grad` ~~~~~~~~~~~ .. autofunction:: monai.networks.layers.grid_grad `LLTM` ~~~~~~ .. autoclass:: LLTM :members: `Utilities` ~~~~~~~~~~~ .. automodule:: monai.networks.layers.convutils :members: .. automodule:: monai.networks.layers.utils :members: Nets ---- .. currentmodule:: monai.networks.nets `AHNet` ~~~~~~~ .. autoclass:: AHNet :members: `DenseNet` ~~~~~~~~~~ .. autoclass:: DenseNet :members: `DenseNet121` ~~~~~~~~~~~~~ .. autoclass:: DenseNet121 `DenseNet169` ~~~~~~~~~~~~~ .. autoclass:: DenseNet169 `DenseNet201` ~~~~~~~~~~~~~ .. autoclass:: DenseNet201 `DenseNet264` ~~~~~~~~~~~~~ .. autoclass:: DenseNet264 `EfficientNet` ~~~~~~~~~~~~~~ .. autoclass:: EfficientNet :members: `BlockArgs` ~~~~~~~~~~~ .. autoclass:: BlockArgs :members: `EfficientNetBN` ~~~~~~~~~~~~~~~~ .. autoclass:: EfficientNetBN :members: `EfficientNetBNFeatures` ~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: EfficientNetBNFeatures :members: `SegResNet` ~~~~~~~~~~~ .. autoclass:: SegResNet :members: `SegResNetDS` ~~~~~~~~~~~~~ .. autoclass:: SegResNetDS :members: `SegResNetVAE` ~~~~~~~~~~~~~~ .. autoclass:: SegResNetVAE :members: `ResNet` ~~~~~~~~ .. autoclass:: ResNet :members: `SENet` ~~~~~~~ .. autoclass:: SENet :members: `SENet154` ~~~~~~~~~~ .. autoclass:: SENet154 `SEResNet50` ~~~~~~~~~~~~ .. autoclass:: SEResNet50 `SEResNet101` ~~~~~~~~~~~~~ .. autoclass:: SEResNet101 `SEResNet152` ~~~~~~~~~~~~~ .. autoclass:: SEResNet152 `SEResNext50` ~~~~~~~~~~~~~ .. autoclass:: SEResNext50 `SEResNext101` ~~~~~~~~~~~~~~ .. autoclass:: SEResNext101 `HighResNet` ~~~~~~~~~~~~ .. autoclass:: HighResNet :members: .. autoclass:: HighResBlock :members: `DynUNet` ~~~~~~~~~ .. autoclass:: DynUNet :members: .. autoclass:: DynUnet .. autoclass:: Dynunet `UNet` ~~~~~~ .. autoclass:: UNet :members: .. autoclass:: Unet .. autoclass:: unet `AttentionUnet` ~~~~~~~~~~~~~~~ .. autoclass:: AttentionUnet :members: `UNETR` ~~~~~~~ .. autoclass:: UNETR :members: `SwinUNETR` ~~~~~~~~~~~ .. autoclass:: SwinUNETR :members: `BasicUNet` ~~~~~~~~~~~ .. autoclass:: BasicUNet :members: .. autoclass:: BasicUnet .. autoclass:: Basicunet `BasicUNetPlusPlus` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: BasicUNetPlusPlus :members: .. autoclass:: BasicUnetPlusPlus .. autoclass:: BasicunetPlusPlus `FlexibleUNet` ~~~~~~~~~~~~~~ .. autoclass:: FlexibleUNet :members: `VNet` ~~~~~~ .. autoclass:: VNet :members: `RegUNet` ~~~~~~~~~ .. autoclass:: RegUNet :members: `GlobalNet` ~~~~~~~~~~~~ .. autoclass:: GlobalNet :members: `LocalNet` ~~~~~~~~~~~ .. autoclass:: LocalNet :members: `AutoEncoder` ~~~~~~~~~~~~~ .. autoclass:: AutoEncoder :members: `VarAutoEncoder` ~~~~~~~~~~~~~~~~ .. autoclass:: VarAutoEncoder :members: `ViT` ~~~~~ .. autoclass:: ViT :members: `ViTAutoEnc` ~~~~~~~~~~~~ .. autoclass:: ViTAutoEnc :members: `FullyConnectedNet` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: FullyConnectedNet :members: `VarFullyConnectedNet` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: VarFullyConnectedNet :members: `Generator` ~~~~~~~~~~~ .. autoclass:: Generator :members: `Regressor` ~~~~~~~~~~~ .. autoclass:: Regressor :members: `Classifier` ~~~~~~~~~~~~ .. autoclass:: Classifier :members: `Discriminator` ~~~~~~~~~~~~~~~ .. autoclass:: Discriminator :members: `Critic` ~~~~~~~~ .. autoclass:: Critic :members: `Transchex` ~~~~~~~~~~~~~~~~ .. autoclass:: Transchex :members: `NetAdapter` ~~~~~~~~~~~~ .. autoclass:: NetAdapter :members: `TorchVisionFCModel` ~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TorchVisionFCModel :members: `MILModel` ~~~~~~~~~~ .. autoclass:: MILModel :members: `DiNTS` ~~~~~~~ .. autoclass:: DiNTS :members: `TopologyConstruction for DiNTS` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TopologyConstruction :members: `TopologyInstance for DiNTS` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TopologyInstance :members: `TopologySearch for DiNTS` ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: TopologySearch :members: `ComplexUnet` ~~~~~~~~~~~~~ .. autoclass:: monai.apps.reconstruction.networks.nets.complex_unet.ComplexUnet :members: `CoilSensitivityModel` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: monai.apps.reconstruction.networks.nets.coil_sensitivity_model.CoilSensitivityModel :members: `e2e-VarNet` ~~~~~~~~~~~~ .. autoclass:: monai.apps.reconstruction.networks.nets.varnet.VariationalNetworkModel :members: `DAF3D` ~~~~~~~~~~~~ .. autoclass:: DAF3D :members: `Quicknat` ~~~~~~~~~~~~ .. autoclass:: Quicknat :members: Utilities --------- .. automodule:: monai.networks.utils :members: .. automodule:: monai.apps.reconstruction.networks.nets.utils :members: