Index

_

__call__() (monai.inferers.Inferer method) (monai.inferers.SimpleInferer method) (monai.inferers.SlidingWindowInferer method) (monai.transforms.Activations method) (monai.transforms.Activationsd method) (monai.transforms.AddChannel method) (monai.transforms.AddChanneld method) (monai.transforms.AdjustContrast method) (monai.transforms.AdjustContrastd method) (monai.transforms.Affine method) (monai.transforms.AffineGrid method) (monai.transforms.AsChannelFirst method) (monai.transforms.AsChannelFirstd method) (monai.transforms.AsChannelLast method) (monai.transforms.AsChannelLastd method) (monai.transforms.AsDiscrete method) (monai.transforms.AsDiscreted method) (monai.transforms.BorderPad method) (monai.transforms.BorderPadd method) (monai.transforms.BoundingRect method) (monai.transforms.BoundingRectd method) (monai.transforms.CastToType method) (monai.transforms.CastToTyped method) (monai.transforms.CenterSpatialCrop method) (monai.transforms.CenterSpatialCropd method) (monai.transforms.Compose method) (monai.transforms.ConcatItemsd method) (monai.transforms.CopyItemsd method) (monai.transforms.CropForeground method) (monai.transforms.CropForegroundd method) (monai.transforms.DataStats method) (monai.transforms.DataStatsd method) (monai.transforms.DeleteItemsd method) (monai.transforms.DetectEnvelope method) (monai.transforms.DivisiblePad method) (monai.transforms.DivisiblePadd method) (monai.transforms.Ensembled method) (monai.transforms.FgBgToIndices method) (monai.transforms.FgBgToIndicesd method) (monai.transforms.Flip method) (monai.transforms.Flipd method) (monai.transforms.GaussianSharpen method) (monai.transforms.GaussianSharpend method) (monai.transforms.GaussianSmooth method) (monai.transforms.GaussianSmoothd method) (monai.transforms.Identity method) (monai.transforms.Identityd method) (monai.transforms.KeepLargestConnectedComponent method) (monai.transforms.KeepLargestConnectedComponentd method) (monai.transforms.LabelToContour method) (monai.transforms.LabelToContourd method) (monai.transforms.LabelToMask method) (monai.transforms.LabelToMaskd method) (monai.transforms.Lambda method) (monai.transforms.Lambdad method) (monai.transforms.LoadDatad method) (monai.transforms.LoadImage method) (monai.transforms.LoadImaged method) (monai.transforms.LoadNifti method) (monai.transforms.LoadNumpy method) (monai.transforms.LoadPNG method) (monai.transforms.MapTransform method) (monai.transforms.MaskIntensity method) (monai.transforms.MaskIntensityd method) (monai.transforms.MeanEnsemble method) (monai.transforms.NormalizeIntensity method) (monai.transforms.NormalizeIntensityd method) (monai.transforms.Orientation method) (monai.transforms.Orientationd method) (monai.transforms.Rand2DElastic method) (monai.transforms.Rand2DElasticd method) (monai.transforms.Rand3DElastic method) (monai.transforms.Rand3DElasticd method) (monai.transforms.RandAdjustContrast method) (monai.transforms.RandAdjustContrastd method) (monai.transforms.RandAffine method) (monai.transforms.RandAffined method) (monai.transforms.RandAffineGrid method) (monai.transforms.RandCropByPosNegLabel method) (monai.transforms.RandCropByPosNegLabeld method) (monai.transforms.RandDeformGrid method) (monai.transforms.RandFlip method) (monai.transforms.RandFlipd method) (monai.transforms.RandGaussianNoise method) (monai.transforms.RandGaussianNoised method) (monai.transforms.RandGaussianSharpen method) (monai.transforms.RandGaussianSharpend method) (monai.transforms.RandGaussianSmooth method) (monai.transforms.RandGaussianSmoothd method) (monai.transforms.RandHistogramShift method) (monai.transforms.RandHistogramShiftd method) (monai.transforms.RandRotate method) (monai.transforms.RandRotate90 method) (monai.transforms.RandRotate90d method) (monai.transforms.RandRotated method) (monai.transforms.RandScaleIntensity method) (monai.transforms.RandScaleIntensityd method) (monai.transforms.RandShiftIntensity method) (monai.transforms.RandShiftIntensityd method) (monai.transforms.RandSpatialCrop method) (monai.transforms.RandSpatialCropd method) (monai.transforms.RandSpatialCropSamples method) (monai.transforms.RandSpatialCropSamplesd method) (monai.transforms.RandWeightedCrop method) (monai.transforms.RandWeightedCropd method) (monai.transforms.RandZoom method) (monai.transforms.RandZoomd method) (monai.transforms.RepeatChannel method) (monai.transforms.RepeatChanneld method) (monai.transforms.Resample method) (monai.transforms.Resize method) (monai.transforms.Resized method) (monai.transforms.ResizeWithPadOrCrop method) (monai.transforms.ResizeWithPadOrCropd method) (monai.transforms.Rotate method) (monai.transforms.Rotate90 method) (monai.transforms.Rotate90d method) (monai.transforms.Rotated method) (monai.transforms.ScaleIntensity method) (monai.transforms.ScaleIntensityd method) (monai.transforms.ScaleIntensityRange method) (monai.transforms.ScaleIntensityRanged method) (monai.transforms.ScaleIntensityRangePercentiles method) (monai.transforms.ScaleIntensityRangePercentilesd method) (monai.transforms.SelectItemsd method) (monai.transforms.ShiftIntensity method) (monai.transforms.ShiftIntensityd method) (monai.transforms.SimulateDelay method) (monai.transforms.SimulateDelayd method) (monai.transforms.Spacing method) (monai.transforms.Spacingd method) (monai.transforms.SpatialCrop method) (monai.transforms.SpatialCropd method) (monai.transforms.SpatialPad method) (monai.transforms.SpatialPadd method) (monai.transforms.SplitChannel method) (monai.transforms.SplitChanneld method) (monai.transforms.SqueezeDim method) (monai.transforms.SqueezeDimd method) (monai.transforms.ThresholdIntensity method) (monai.transforms.ThresholdIntensityd method) (monai.transforms.ToNumpy method) (monai.transforms.ToNumpyd method) (monai.transforms.ToTensor method) (monai.transforms.ToTensord method) (monai.transforms.Transform method) (monai.transforms.Transpose method) (monai.transforms.VoteEnsemble method) (monai.transforms.Zoom method) (monai.transforms.Zoomd method)

A

Activations (class in monai.transforms) Activationsd (class in monai.transforms) adaptor() (in module monai.transforms.adaptors) add_animated_gif() (in module monai.visualize.img2tensorboard) add_animated_gif_no_channels() (in module monai.visualize.img2tensorboard) add_factory_callable() (monai.networks.layers.LayerFactory method) AddChannel (class in monai.transforms) AddChanneld (class in monai.transforms) AdjustContrast (class in monai.transforms) AdjustContrastd (class in monai.transforms) ADN (class in monai.networks.blocks) Affine (class in monai.transforms) AffineGrid (class in monai.transforms) AffineTransform (class in monai.networks.layers) AHNet (class in monai.networks.nets) alias() (in module monai.utils.aliases) apply_alias() (in module monai.transforms.adaptors) apply_transform() (in module monai.transforms.utils)

ArrayDataset (class in monai.data) AsChannelFirst (class in monai.transforms) AsChannelFirstd (class in monai.transforms) AsChannelLast (class in monai.transforms) AsChannelLastd (class in monai.transforms) AsDiscrete (class in monai.transforms) AsDiscreted (class in monai.transforms) attach() (monai.handlers.CheckpointLoader method) (monai.handlers.CheckpointSaver method) (monai.handlers.ClassificationSaver method) (monai.handlers.LrScheduleHandler method) (monai.handlers.MetricLogger method) (monai.handlers.SegmentationSaver method) (monai.handlers.SmartCacheHandler method) (monai.handlers.StatsHandler method) (monai.handlers.TensorBoardImageHandler method) (monai.handlers.TensorBoardStatsHandler method) (monai.handlers.ValidationHandler method) AutoEncoder (class in monai.networks.nets)

B

BasicUNet (class in monai.networks.nets) BasicUnet (in module monai.networks.nets) Basicunet (in module monai.networks.nets)

BorderPad (class in monai.transforms) BorderPadd (class in monai.transforms) BoundingRect (class in monai.transforms) BoundingRectd (class in monai.transforms)

C

CacheDataset (class in monai.data) CacheNTransDataset (class in monai.data) calculate_out_shape() (in module monai.networks.layers.convutils) CAM (class in monai.visualize.class_activation_maps) CastToType (class in monai.transforms) CastToTyped (class in monai.transforms) CenterSpatialCrop (class in monai.transforms) CenterSpatialCropd (class in monai.transforms) ChannelSELayer (class in monai.networks.blocks) check_hash() (in module monai.apps) CheckpointLoader (class in monai.handlers) CheckpointSaver (class in monai.handlers) ClassificationSaver (class in monai.handlers) Classifier (class in monai.networks.nets) completed() (monai.handlers.CheckpointSaver method) (monai.handlers.SmartCacheHandler method) Compose (class in monai.transforms) compute() (monai.handlers.ConfusionMatrix method) (monai.handlers.HausdorffDistance method) (monai.handlers.MeanDice method) (monai.handlers.SurfaceDistance method) compute_average_surface_distance() (in module monai.metrics) compute_hausdorff_distance() (in module monai.metrics) compute_importance_map() (in module monai.data.utils) compute_map() (monai.visualize.class_activation_maps.CAM method) (monai.visualize.class_activation_maps.GradCAM method) (monai.visualize.class_activation_maps.GradCAMpp method)

compute_meandice() (in module monai.metrics) compute_occlusion_sensitivity() (in module monai.metrics) compute_roc_auc() (in module monai.metrics) compute_shape_offset() (in module monai.data.utils) ConcatItemsd (class in monai.transforms) ConfusionMatrix (class in monai.handlers) ConfusionMatrixMetric (class in monai.metrics) Convolution (class in monai.networks.blocks) CopyItemsd (class in monai.transforms) copypaste_arrays() (in module monai.transforms.utils) correct_nifti_header_if_necessary() (in module monai.data.utils) create_control_grid() (in module monai.transforms.utils) create_file_basename() (in module monai.data.utils) create_grid() (in module monai.transforms.utils) create_multigpu_supervised_evaluator() (in module monai.engines.multi_gpu_supervised_trainer) create_multigpu_supervised_trainer() (in module monai.engines.multi_gpu_supervised_trainer) create_rotate() (in module monai.transforms.utils) create_scale() (in module monai.transforms.utils) create_shear() (in module monai.transforms.utils) create_test_image_2d() (in module monai.data.synthetic) create_test_image_3d() (in module monai.data.synthetic) create_translate() (in module monai.transforms.utils) Critic (class in monai.networks.nets) CropForeground (class in monai.transforms) CropForegroundd (class in monai.transforms) CrossValidation (class in monai.apps)

D

DataLoader (class in monai.data) Dataset (class in monai.data) DataStats (class in monai.transforms) DataStatsd (class in monai.transforms) DecathlonDataset (class in monai.apps) default_normalizer() (in module monai.visualize.class_activation_maps) default_upsampler() (in module monai.visualize.class_activation_maps) DeleteItemsd (class in monai.transforms) dense_patch_slices() (in module monai.data.utils) DenseNet (class in monai.networks.nets) densenet121() (in module monai.networks.nets) densenet169() (in module monai.networks.nets) densenet201() (in module monai.networks.nets) densenet264() (in module monai.networks.nets) DetectEnvelope (class in monai.transforms)

Dice (in module monai.losses) dice (in module monai.losses) DiceLoss (class in monai.losses) DiceMetric (class in monai.metrics) Discriminator (class in monai.networks.nets) DistributedSampler (class in monai.data) (class in monai.data.utils) DivisiblePad (class in monai.transforms) DivisiblePadd (class in monai.transforms) download_and_extract() (in module monai.apps) download_url() (in module monai.apps) dtype_numpy_to_torch() (in module monai.utils.misc) dtype_torch_to_numpy() (in module monai.utils.misc) DynUNet (class in monai.networks.nets) DynUnet (in module monai.networks.nets) Dynunet (in module monai.networks.nets)

E

Ensembled (class in monai.transforms) EnsembleEvaluator (class in monai.engines) ensure_tuple() (in module monai.utils.misc) ensure_tuple_rep() (in module monai.utils.misc) ensure_tuple_size() (in module monai.utils.misc) epoch_completed() (monai.handlers.SmartCacheHandler method) (monai.handlers.StatsHandler method) (monai.handlers.TensorBoardStatsHandler method)

Evaluator (class in monai.engines) exact_version() (in module monai.utils.module) exception_raised() (monai.handlers.CheckpointSaver method) (monai.handlers.StatsHandler method) export() (in module monai.utils.module) extractall() (in module monai.apps) extreme_points_to_image() (in module monai.transforms.utils)

F

factory_function() (monai.networks.layers.LayerFactory method) fall_back_tuple() (in module monai.utils.misc) FCN (class in monai.networks.blocks) feature_map_size() (monai.visualize.class_activation_maps.CAM method) (monai.visualize.class_activation_maps.GradCAM method) FgBgToIndices (class in monai.transforms) FgBgToIndicesd (class in monai.transforms) first() (in module monai.utils.misc) Flatten (class in monai.networks.layers) Flip (class in monai.transforms) Flipd (class in monai.transforms) FocalLoss (class in monai.losses) forward() (monai.losses.DiceLoss method) (monai.losses.FocalLoss method) (monai.losses.GeneralizedDiceLoss method) (monai.losses.GeneralizedWassersteinDiceLoss method) (monai.losses.MaskedDiceLoss method) (monai.losses.TverskyLoss method) (monai.networks.blocks.ChannelSELayer method) (monai.networks.blocks.FCN method) (monai.networks.blocks.GCN method) (monai.networks.blocks.MaxAvgPool method) (monai.networks.blocks.MCFCN method) (monai.networks.blocks.Mish method) (monai.networks.blocks.Refine method) (monai.networks.blocks.ResBlock method) (monai.networks.blocks.ResidualUnit method) (monai.networks.blocks.SEBlock method) (monai.networks.blocks.SimpleASPP method) (monai.networks.blocks.SubpixelUpsample method) (monai.networks.blocks.Swish method) (monai.networks.blocks.UnetBasicBlock method) (monai.networks.blocks.UnetResBlock method) (monai.networks.blocks.UnetUpBlock method) (monai.networks.layers.AffineTransform method) (monai.networks.layers.Flatten method) (monai.networks.layers.GaussianFilter method) (monai.networks.layers.HilbertTransform method) (monai.networks.layers.LLTM method) (monai.networks.layers.SkipConnection method) (monai.networks.nets.AHNet method) (monai.networks.nets.AutoEncoder method) (monai.networks.nets.BasicUNet method) (monai.networks.nets.Critic method) (monai.networks.nets.DenseNet method) (monai.networks.nets.DynUNet method) (monai.networks.nets.Generator method) (monai.networks.nets.HighResBlock method) (monai.networks.nets.HighResNet method) (monai.networks.nets.Regressor method) (monai.networks.nets.SegResNet method) (monai.networks.nets.SegResNetVAE method) (monai.networks.nets.SENet method) (monai.networks.nets.UNet method) (monai.networks.nets.VarAutoEncoder method) (monai.networks.nets.VNet method)

FullyConnectedNet (class in monai.networks.nets)

G

GanTrainer (class in monai.engines) gaussian_1d() (in module monai.networks.layers.convutils) GaussianFilter (class in monai.networks.layers) GaussianSharpen (class in monai.transforms) GaussianSharpend (class in monai.transforms) GaussianSmooth (class in monai.transforms) GaussianSmoothd (class in monai.transforms) GCN (class in monai.networks.blocks) generalized_dice (in module monai.losses) generalized_wasserstein_dice (in module monai.losses) GeneralizedDiceLoss (class in monai.losses) GeneralizedWassersteinDiceLoss (class in monai.losses) generate_param_groups() (in module monai.optimizers) generate_pos_neg_label_crop_centers() (in module monai.transforms.utils) generate_spatial_bounding_box() (in module monai.transforms.utils) Generator (class in monai.networks.nets) get_config_values() (in module monai.config.deviceconfig) get_confusion_matrix() (in module monai.metrics) get_constructor() (monai.networks.layers.LayerFactory method) get_data() (monai.data.ITKReader method) (monai.data.NibabelReader method) (monai.data.NumpyReader method) (monai.data.PILReader method)

get_dataset() (monai.apps.CrossValidation method) get_extreme_points() (in module monai.transforms.utils) get_indices() (monai.apps.DecathlonDataset method) get_largest_connected_component_mask() (in module monai.transforms.utils) get_layer() (monai.visualize.class_activation_maps.ModelWithHooks method) get_optional_config_values() (in module monai.config.deviceconfig) get_package_version() (in module monai.utils.module) get_properties() (monai.apps.DecathlonDataset method) get_random_patch() (in module monai.data.utils) get_system_info() (in module monai.config.deviceconfig) get_torch_version_tuple() (in module monai.utils.module) get_valid_patch_size() (in module monai.data.utils) GradCAM (class in monai.visualize.class_activation_maps) GradCAMpp (class in monai.visualize.class_activation_maps) grid_count() (in module monai.networks.layers) grid_grad() (in module monai.networks.layers) grid_pull() (in module monai.networks.layers) grid_push() (in module monai.networks.layers) GridPatchDataset (class in monai.data)

H

has_option() (in module monai.utils.module) HausdorffDistance (class in monai.handlers) HausdorffDistanceMetric (class in monai.metrics)

HighResBlock (class in monai.networks.nets) HighResNet (class in monai.networks.nets) HilbertTransform (class in monai.networks.layers)

I

icnr_init() (in module monai.networks.utils) Identity (class in monai.transforms) Identityd (class in monai.transforms) img_bounds() (in module monai.transforms.utils) in_bounds() (in module monai.transforms.utils) Inferer (class in monai.inferers) info() (monai.data.LMDBDataset method) interval_completed() (monai.handlers.CheckpointSaver method) InvalidPyTorchVersionError

is_empty() (in module monai.transforms.utils) is_started() (monai.data.SmartCacheDataset method) is_supported_format() (in module monai.data.utils) issequenceiterable() (in module monai.utils.misc) iter_patch() (in module monai.data.utils) iter_patch_slices() (in module monai.data.utils) IterableDataset (class in monai.data) iteration_completed() (monai.handlers.StatsHandler method) (monai.handlers.TensorBoardStatsHandler method) ITKReader (class in monai.data)

J

json_hashing() (in module monai.data.utils)

K

KeepLargestConnectedComponent (class in monai.transforms)

KeepLargestConnectedComponentd (class in monai.transforms)

L

LabelToContour (class in monai.transforms) LabelToContourd (class in monai.transforms) LabelToMask (class in monai.transforms) LabelToMaskd (class in monai.transforms) Lambda (class in monai.transforms) Lambdad (class in monai.transforms) LayerFactory (class in monai.networks.layers) list_data_collate() (in module monai.data.utils) list_to_dict() (in module monai.utils.misc) LLTM (class in monai.networks.layers) LMDBDataset (class in monai.data)

load_decathlon_datalist() (in module monai.data) load_submodules() (in module monai.utils.module) LoadDatad (class in monai.transforms) LoadImage (class in monai.transforms) LoadImaged (class in monai.transforms) LoadNifti (class in monai.transforms) LoadNiftid (class in monai.transforms) LoadNumpy (class in monai.transforms) LoadNumpyd (class in monai.transforms) LoadPNG (class in monai.transforms) LoadPNGd (class in monai.transforms) LrScheduleHandler (class in monai.handlers)

M

make_animated_gif_summary() (in module monai.visualize.img2tensorboard) manage_replacement() (monai.data.SmartCacheDataset method) map_binary_to_indices() (in module monai.transforms.utils) MapTransform (class in monai.transforms) MaskedDiceLoss (class in monai.losses) MaskIntensity (class in monai.transforms) MaskIntensityd (class in monai.transforms) MaxAvgPool (class in monai.networks.blocks) MCFCN (class in monai.networks.blocks) MeanDice (class in monai.handlers) MeanEnsemble (class in monai.transforms) MeanEnsembled (class in monai.transforms) MedNISTDataset (class in monai.apps) MetricLogger (class in monai.handlers) metrics_completed() (monai.handlers.CheckpointSaver method) min_version() (in module monai.utils.module) Mish (class in monai.networks.blocks) ModelWithHooks (class in monai.visualize.class_activation_maps) module monai monai.config.deviceconfig monai.data.synthetic monai.data.utils monai.engines.multi_gpu_supervised_trainer monai.engines.workflow monai.losses monai.networks.blocks monai.networks.layers.Act monai.networks.layers.Conv monai.networks.layers.convutils monai.networks.layers.Dropout monai.networks.layers.factories monai.networks.layers.Norm monai.networks.layers.Pool monai.networks.utils monai.transforms monai.transforms.adaptors monai.transforms.utils monai.utils.aliases monai.utils.misc monai.utils.module monai.utils.profiling monai.visualize.class_activation_maps monai.visualize.img2tensorboard monai module monai.config.deviceconfig module

monai.data.synthetic module monai.data.utils module monai.engines.multi_gpu_supervised_trainer module monai.engines.workflow module monai.losses module monai.networks.blocks module monai.networks.layers.Act module monai.networks.layers.Conv module monai.networks.layers.convutils module monai.networks.layers.Dropout module monai.networks.layers.factories module monai.networks.layers.Norm module monai.networks.layers.Pool module monai.networks.utils module monai.transforms module monai.transforms.adaptors module monai.transforms.utils module monai.utils.aliases module monai.utils.misc module monai.utils.module module monai.utils.profiling module monai.visualize.class_activation_maps module monai.visualize.img2tensorboard module

N

names() (monai.networks.layers.LayerFactory property) NibabelReader (class in monai.data) NiftiDataset (class in monai.data) NiftiSaver (class in monai.data) normal_init() (in module monai.networks.utils)

normalize_transform() (in module monai.networks.utils) NormalizeIntensity (class in monai.transforms) NormalizeIntensityd (class in monai.transforms) Novograd (class in monai.optimizers) NumpyReader (class in monai.data)

O

one_hot() (in module monai.networks.utils) optional_import() (in module monai.utils.module)

OptionalImportError Orientation (class in monai.transforms) Orientationd (class in monai.transforms)

P

partition_dataset() (in module monai.data) (in module monai.data.utils) partition_dataset_classes() (in module monai.data) (in module monai.data.utils) PatchDataset (class in monai.data) PerfContext (class in monai.utils.profiling) PersistentDataset (class in monai.data) pickle_hashing() (in module monai.data.utils) PILReader (class in monai.data)

pixelshuffle() (in module monai.networks.utils) plot_2d_or_3d_image() (in module monai.visualize.img2tensorboard) PNGSaver (class in monai.data) polyval() (in module monai.networks.layers.convutils) predict_segmentation() (in module monai.networks.utils) print_config() (in module monai.config.deviceconfig) print_debug_info() (in module monai.config.deviceconfig) print_gpu_info() (in module monai.config.deviceconfig) print_system_info() (in module monai.config.deviceconfig) progress_bar() (in module monai.utils.misc)

R

Rand2DElastic (class in monai.transforms) Rand2DElasticd (class in monai.transforms) Rand3DElastic (class in monai.transforms) Rand3DElasticd (class in monai.transforms) rand_choice() (in module monai.transforms.utils) RandAdjustContrast (class in monai.transforms) RandAdjustContrastd (class in monai.transforms) RandAffine (class in monai.transforms) RandAffined (class in monai.transforms) RandAffineGrid (class in monai.transforms) RandCropByPosNegLabel (class in monai.transforms) RandCropByPosNegLabeld (class in monai.transforms) RandDeformGrid (class in monai.transforms) RandFlip (class in monai.transforms) RandFlipd (class in monai.transforms) RandGaussianNoise (class in monai.transforms) RandGaussianNoised (class in monai.transforms) RandGaussianSharpen (class in monai.transforms) RandGaussianSharpend (class in monai.transforms) RandGaussianSmooth (class in monai.transforms) RandGaussianSmoothd (class in monai.transforms) RandHistogramShift (class in monai.transforms) RandHistogramShiftd (class in monai.transforms) Randomizable (class in monai.transforms) randomize() (monai.apps.DecathlonDataset method) (monai.apps.MedNISTDataset method) (monai.data.ArrayDataset method) (monai.data.NiftiDataset method) (monai.transforms.Compose method) (monai.transforms.Rand2DElastic method) (monai.transforms.Rand2DElasticd method) (monai.transforms.Rand3DElastic method) (monai.transforms.Rand3DElasticd method) (monai.transforms.RandAdjustContrast method) (monai.transforms.RandAdjustContrastd method) (monai.transforms.RandAffine method) (monai.transforms.RandAffined method) (monai.transforms.RandAffineGrid method) (monai.transforms.RandCropByPosNegLabel method) (monai.transforms.RandCropByPosNegLabeld method) (monai.transforms.RandDeformGrid method) (monai.transforms.RandFlip method) (monai.transforms.RandFlipd method) (monai.transforms.RandGaussianNoise method) (monai.transforms.RandGaussianNoised method) (monai.transforms.RandGaussianSharpen method) (monai.transforms.RandGaussianSharpend method) (monai.transforms.RandGaussianSmooth method) (monai.transforms.RandGaussianSmoothd method) (monai.transforms.RandHistogramShift method) (monai.transforms.RandHistogramShiftd method) (monai.transforms.Randomizable method) (monai.transforms.RandRotate method) (monai.transforms.RandRotate90 method) (monai.transforms.RandRotate90d method) (monai.transforms.RandRotated method) (monai.transforms.RandScaleIntensity method) (monai.transforms.RandScaleIntensityd method) (monai.transforms.RandShiftIntensity method) (monai.transforms.RandShiftIntensityd method) (monai.transforms.RandSpatialCrop method) (monai.transforms.RandSpatialCropd method) (monai.transforms.RandSpatialCropSamples method) (monai.transforms.RandSpatialCropSamplesd method) (monai.transforms.RandWeightedCrop method) (monai.transforms.RandWeightedCropd method) (monai.transforms.RandZoom method) (monai.transforms.RandZoomd method)

RandRotate (class in monai.transforms) RandRotate90 (class in monai.transforms) RandRotate90d (class in monai.transforms) RandRotated (class in monai.transforms) RandScaleIntensity (class in monai.transforms) RandScaleIntensityd (class in monai.transforms) RandShiftIntensity (class in monai.transforms) RandShiftIntensityd (class in monai.transforms) RandSpatialCrop (class in monai.transforms) RandSpatialCropd (class in monai.transforms) RandSpatialCropSamples (class in monai.transforms) RandSpatialCropSamplesd (class in monai.transforms) RandWeightedCrop (class in monai.transforms) RandWeightedCropd (class in monai.transforms) RandZoom (class in monai.transforms) RandZoomd (class in monai.transforms) read() (monai.data.ITKReader method) (monai.data.NibabelReader method) (monai.data.NumpyReader method) (monai.data.PILReader method) rectify_header_sform_qform() (in module monai.data.utils) Refine (class in monai.networks.blocks) register() (monai.transforms.LoadImage method) (monai.transforms.LoadImaged method) Regressor (class in monai.networks.nets) RepeatChannel (class in monai.transforms) RepeatChanneld (class in monai.transforms) Resample (class in monai.transforms) ResBlock (class in monai.networks.blocks) rescale_array() (in module monai.transforms.utils) rescale_array_int_max() (in module monai.transforms.utils) rescale_instance_array() (in module monai.transforms.utils) reset() (monai.handlers.ConfusionMatrix method) (monai.handlers.HausdorffDistance method) (monai.handlers.MeanDice method) (monai.handlers.SurfaceDistance method) ResidualSELayer (class in monai.networks.blocks) ResidualUnit (class in monai.networks.blocks) Resize (class in monai.transforms) resize_center() (in module monai.transforms.utils) Resized (class in monai.transforms) ResizeWithPadOrCrop (class in monai.transforms) ResizeWithPadOrCropd (class in monai.transforms) resolve_name() (in module monai.utils.aliases) ROCAUC (class in monai.handlers) Rotate (class in monai.transforms) Rotate90 (class in monai.transforms) Rotate90d (class in monai.transforms) Rotated (class in monai.transforms) run() (monai.engines.Evaluator method) (monai.engines.Trainer method) (monai.engines.workflow.Workflow method)

S

same_padding() (in module monai.networks.layers.convutils) save() (monai.data.NiftiSaver method) (monai.data.PNGSaver method) save_batch() (monai.data.NiftiSaver method) (monai.data.PNGSaver method) ScaleIntensity (class in monai.transforms) ScaleIntensityd (class in monai.transforms) ScaleIntensityRange (class in monai.transforms) ScaleIntensityRanged (class in monai.transforms) ScaleIntensityRangePercentiles (class in monai.transforms) ScaleIntensityRangePercentilesd (class in monai.transforms) se_resnet101() (in module monai.networks.nets) se_resnet152() (in module monai.networks.nets) se_resnet50() (in module monai.networks.nets) se_resnext101_32x4d() (in module monai.networks.nets) se_resnext50_32x4d() (in module monai.networks.nets) SEBlock (class in monai.networks.blocks) SEBottleneck (class in monai.networks.blocks) SegmentationSaver (class in monai.handlers) SegResNet (class in monai.networks.nets) SegResNetVAE (class in monai.networks.nets) select_cross_validation_folds() (in module monai.data.utils) SelectItemsd (class in monai.transforms) SENet (class in monai.networks.nets) senet154() (in module monai.networks.nets) SEResNetBottleneck (class in monai.networks.blocks) SEResNeXtBottleneck (class in monai.networks.blocks) set_determinism() (in module monai.utils.misc) set_random_state() (monai.transforms.Compose method) (monai.transforms.Rand2DElastic method) (monai.transforms.Rand2DElasticd method) (monai.transforms.Rand3DElastic method) (monai.transforms.Rand3DElasticd method) (monai.transforms.RandAffine method) (monai.transforms.RandAffined method) (monai.transforms.Randomizable method) (monai.transforms.RandSpatialCropSamples method) (monai.transforms.RandSpatialCropSamplesd method)

set_rnd() (in module monai.data.utils) ShiftIntensity (class in monai.transforms) ShiftIntensityd (class in monai.transforms) shutdown() (monai.data.SmartCacheDataset method) SimpleASPP (class in monai.networks.blocks) SimpleInferer (class in monai.inferers) SimulateDelay (class in monai.transforms) SimulateDelayd (class in monai.transforms) SkipConnection (class in monai.networks.layers) sliding_window_inference() (in module monai.inferers) SlidingWindowInferer (class in monai.inferers) SmartCacheDataset (class in monai.data) SmartCacheHandler (class in monai.handlers) sorted_dict() (in module monai.data.utils) Spacing (class in monai.transforms) Spacingd (class in monai.transforms) SpatialCrop (class in monai.transforms) SpatialCropd (class in monai.transforms) SpatialPad (class in monai.transforms) SpatialPadd (class in monai.transforms) split_args() (in module monai.networks.layers) SplitChannel (class in monai.transforms) SplitChanneld (class in monai.transforms) SqueezeDim (class in monai.transforms) SqueezeDimd (class in monai.transforms) star_zip_with() (in module monai.utils.misc) start() (monai.data.SmartCacheDataset method) started() (monai.handlers.SmartCacheHandler method) StatsHandler (class in monai.handlers) step() (monai.optimizers.Novograd method) SubpixelUpsample (class in monai.networks.blocks) SubpixelUpSample (in module monai.networks.blocks) Subpixelupsample (in module monai.networks.blocks) SupervisedEvaluator (class in monai.engines) SupervisedTrainer (class in monai.engines) SurfaceDistance (class in monai.handlers) SurfaceDistanceMetric (class in monai.metrics) Swish (class in monai.networks.blocks)

T

TensorBoardImageHandler (class in monai.handlers) TensorBoardStatsHandler (class in monai.handlers) ThreadBuffer (class in monai.data) ThresholdIntensity (class in monai.transforms) ThresholdIntensityd (class in monai.transforms) to_affine_nd() (in module monai.data.utils) to_kwargs() (in module monai.transforms.adaptors) to_norm_affine() (in module monai.networks.utils) ToNumpy (class in monai.transforms)

ToNumpyd (class in monai.transforms) torch_profiler_full() (in module monai.utils.profiling) torch_profiler_time_cpu_gpu() (in module monai.utils.profiling) torch_profiler_time_end_to_end() (in module monai.utils.profiling) ToTensor (class in monai.transforms) ToTensord (class in monai.transforms) Trainer (class in monai.engines) Transform (class in monai.transforms) Transpose (class in monai.transforms) TverskyLoss (class in monai.losses)

U

UNet (class in monai.networks.nets) Unet (in module monai.networks.nets) unet (in module monai.networks.nets) UnetBasicBlock (class in monai.networks.blocks) UnetResBlock (class in monai.networks.blocks) UnetUpBlock (class in monai.networks.blocks)

update() (monai.handlers.ConfusionMatrix method) (monai.handlers.HausdorffDistance method) (monai.handlers.MeanDice method) (monai.handlers.SurfaceDistance method) update_cache() (monai.data.SmartCacheDataset method) UpSample (class in monai.networks.blocks) Upsample (in module monai.networks.blocks)

V

ValidationHandler (class in monai.handlers) VarAutoEncoder (class in monai.networks.nets) verify_suffix() (monai.data.ITKReader method) (monai.data.NibabelReader method) (monai.data.NumpyReader method) (monai.data.PILReader method)

VNet (class in monai.networks.nets) VoteEnsemble (class in monai.transforms) VoteEnsembled (class in monai.transforms)

W

wasserstein_distance_map() (monai.losses.GeneralizedWassersteinDiceLoss method) weighted_patch_samples() (in module monai.transforms.utils) worker_init_fn() (in module monai.data.utils)

Workflow (class in monai.engines.workflow) write_nifti() (in module monai.data) write_png() (in module monai.data)

Z

zero_margins() (in module monai.transforms.utils) zip_with() (in module monai.utils.misc) ZipDataset (class in monai.data)

Zoom (class in monai.transforms) zoom_affine() (in module monai.data.utils) Zoomd (class in monai.transforms)