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Utils
MONAI
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A
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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W
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Z
_
__call__() (AddChannel method)
(AddChanneld method)
(AdjustContrast method)
(AdjustContrastd method)
(Affine method)
(AsChannelFirst method)
(AsChannelFirstd method)
(AsChannelLast method)
(AsChannelLastd method)
(CastToType method)
(CastToTyped method)
(CenterSpatialCrop method)
(CenterSpatialCropd method)
(Compose method)
(CropForeground method)
(CropForegroundd method)
(DeleteKeysd method)
(Flip method)
(Flipd method)
(GaussianFilter method)
(LoadNifti method)
(LoadNiftid method)
(LoadPNG method)
(LoadPNGd method)
(MapTransform method)
(NormalizeIntensity method)
(NormalizeIntensityd method)
(Orientation method)
(Orientationd method)
(Rand2DElastic method)
(Rand2DElasticd method)
(Rand3DElastic method)
(Rand3DElasticd method)
(RandAdjustContrast method)
(RandAdjustContrastd method)
(RandAffine method)
(RandAffined method)
(RandAffineGrid method)
(RandCropByPosNegLabeld method)
(RandDeformGrid method)
(RandFlip method)
(RandFlipd method)
(RandGaussianNoise method)
(RandGaussianNoised method)
(RandRotate method)
(RandRotate90 method)
(RandRotate90d method)
(RandRotated method)
(RandScaleIntensity method)
(RandScaleIntensityd method)
(RandShiftIntensity method)
(RandShiftIntensityd method)
(RandSpatialCrop method)
(RandSpatialCropd method)
(RandZoom method)
(RandZoomd method)
(RepeatChannel method)
(RepeatChanneld method)
(Resample method)
(Resize method)
(Resized method)
(Rotate method)
(Rotate90 method)
(Rotate90d method)
(Rotated method)
(ScaleIntensity method)
(ScaleIntensityd method)
(ScaleIntensityRange method)
(ScaleIntensityRanged method)
(ShiftIntensity method)
(ShiftIntensityd method)
(Spacing method)
(Spacingd method)
(SpatialCrop method)
(SpatialCropd method)
(SpatialPad method)
(SpatialPadd method)
(ThresholdIntensity method)
(ThresholdIntensityd method)
(ToTensor method)
(ToTensord method)
(Transform method)
(Transpose method)
(Zoom method)
(Zoomd method)
A
adaptor() (adaptors method)
add_animated_gif() (in module monai.visualize.img2tensorboard)
add_animated_gif_no_channels() (in module monai.visualize.img2tensorboard)
AddChannel (class in monai.transforms.transforms)
AddChanneld (class in monai.transforms.composables)
AdjustContrast (class in monai.transforms.transforms)
AdjustContrastd (class in monai.transforms.composables)
Affine (class in monai.transforms.transforms)
alias() (in module monai.utils.aliases)
apply_alias() (adaptors method)
apply_transform() (in module monai.transforms.utils)
AsChannelFirst (class in monai.transforms.transforms)
AsChannelFirstd (class in monai.transforms.composables)
AsChannelLast (class in monai.transforms.transforms)
AsChannelLastd (class in monai.transforms.composables)
attach() (StatsHandler method)
(TensorBoardStatsHandler method)
C
CacheDataset (class in monai.data.dataset)
CastToType (class in monai.transforms.transforms)
CastToTyped (class in monai.transforms.composables)
CenterSpatialCrop (class in monai.transforms.transforms)
CenterSpatialCropd (class in monai.transforms.composables)
CheckpointLoader (class in monai.handlers.checkpoint_loader)
ClassificationSaver (class in monai.handlers.classification_saver)
Compose (class in monai.transforms.compose)
compute() (MeanDice method)
(ROCAUC method)
compute_meandice() (meandice method)
compute_roc_auc() (rocauc method)
compute_shape_offset() (in module monai.data.utils)
ConvNormActi (class in monai.networks.nets.highresnet)
Convolution (class in monai.networks.blocks.convolutions)
copypaste_arrays() (in module monai.transforms.utils)
correct_nifti_header_if_necessary() (in module monai.data.utils)
create_control_grid() (in module monai.transforms.utils)
create_grid() (in module monai.transforms.utils)
create_multigpu_supervised_evaluator() (in module monai.engine.multi_gpu_supervised_trainer)
create_multigpu_supervised_trainer() (in module monai.engine.multi_gpu_supervised_trainer)
create_rotate() (in module monai.transforms.utils)
create_scale() (in module monai.transforms.utils)
create_shear() (in module monai.transforms.utils)
create_test_image_2d() (in module monai.data.synthetic)
create_test_image_3d() (in module monai.data.synthetic)
create_translate() (in module monai.transforms.utils)
CropForeground (class in monai.transforms.transforms)
CropForegroundd (class in monai.transforms.composables)
D
Dataset (class in monai.data.dataset)
DeleteKeysd (class in monai.transforms.composables)
dense_patch_slices() (in module monai.data.utils)
DenseNet (class in monai.networks.nets.densenet)
densenet121() (densenet method)
densenet169() (densenet method)
densenet201() (densenet method)
densenet264() (densenet method)
DiceLoss (class in monai.losses.dice)
E
epoch_completed() (StatsHandler method)
(TensorBoardStatsHandler method)
exception_raised() (StatsHandler method)
export() (in module monai.utils.module)
F
Flatten (class in monai.networks.layers.simplelayers)
Flip (class in monai.transforms.transforms)
Flipd (class in monai.transforms.composables)
forward() (ConvNormActi method)
(DenseNet method)
(DiceLoss method)
(Flatten method)
(GeneralizedDiceLoss method)
(HighResBlock method)
(HighResNet method)
(ResidualUnit method)
(SkipConnection method)
(UNet method)
G
GaussianFilter (class in monai.networks.layers.simplelayers)
GeneralizedDiceLoss (class in monai.losses.dice)
generate_pos_neg_label_crop_centers() (in module monai.transforms.utils)
generate_spatial_bounding_box() (in module monai.transforms.utils)
get_config_values() (in module monai.config.deviceconfig)
get_devices_spec() (in module monai.engine.multi_gpu_supervised_trainer)
get_random_patch() (in module monai.data.utils)
get_valid_patch_size() (in module monai.data.utils)
GridPatchDataset (class in monai.data.grid_dataset)
H
HighResBlock (class in monai.networks.nets.highresnet)
HighResNet (class in monai.networks.nets.highresnet)
I
img_bounds() (in module monai.transforms.utils)
in_bounds() (in module monai.transforms.utils)
is_empty() (in module monai.transforms.utils)
iter_patch() (in module monai.data.utils)
iter_patch_slices() (in module monai.data.utils)
iteration_completed() (StatsHandler method)
(TensorBoardStatsHandler method)
L
LayerFactory (class in monai.networks.layers.factories)
list_data_collate() (in module monai.data.utils)
load_nifti() (in module monai.data.nifti_reader)
load_submodules() (in module monai.utils.module)
LoadNifti (class in monai.transforms.transforms)
LoadNiftid (class in monai.transforms.composables)
LoadPNG (class in monai.transforms.transforms)
LoadPNGd (class in monai.transforms.composables)
M
make_animated_gif_summary() (in module monai.visualize.img2tensorboard)
MapTransform (class in monai.transforms.compose)
MeanDice (class in monai.handlers.mean_dice)
monai (module)
monai.application (module)
monai.config (module)
monai.config.deviceconfig (module)
monai.data.dataset (module)
monai.data.grid_dataset (module)
monai.data.nifti_reader (module)
monai.data.nifti_saver (module)
monai.data.nifti_writer (module)
monai.data.sliding_window_inference (module)
monai.data.synthetic (module)
monai.data.utils (module)
monai.engine.multi_gpu_supervised_trainer (module)
monai.handlers.checkpoint_loader (module)
monai.handlers.classification_saver (module)
monai.handlers.mean_dice (module)
monai.handlers.metric_logger (module)
monai.handlers.roc_auc (module)
monai.handlers.segmentation_saver (module)
monai.handlers.stats_handler (module)
monai.handlers.tensorboard_handlers (module)
monai.losses.dice (module)
monai.metrics (module)
monai.networks (module)
monai.networks.blocks.convolutions (module)
monai.networks.layers.factories (module)
monai.networks.layers.simplelayers (module)
monai.networks.nets (module)
monai.networks.nets.densenet (module)
monai.networks.nets.highresnet (module)
monai.networks.nets.unet (module)
monai.networks.utils (module)
monai.transforms (module)
monai.transforms.adaptors (module)
monai.transforms.composables (module)
monai.transforms.compose (module)
monai.transforms.transforms (module)
monai.transforms.utils (module)
monai.utils.aliases (module)
monai.utils.module (module)
monai.visualize.img2tensorboard (module)
N
NiftiDataset (class in monai.data.nifti_reader)
NiftiSaver (class in monai.data.nifti_saver)
NormalizeIntensity (class in monai.transforms.transforms)
NormalizeIntensityd (class in monai.transforms.composables)
O
one_hot() (in module monai.networks.utils)
(in module monai.transforms.utils)
Orientation (class in monai.transforms.transforms)
Orientationd (class in monai.transforms.composables)
P
plot_2d_or_3d_image() (in module monai.visualize.img2tensorboard)
predict_segmentation() (in module monai.networks.utils)
print_config() (in module monai.config.deviceconfig)
R
Rand2DElastic (class in monai.transforms.transforms)
Rand2DElasticd (class in monai.transforms.composables)
Rand3DElastic (class in monai.transforms.transforms)
Rand3DElasticd (class in monai.transforms.composables)
rand_choice() (in module monai.transforms.utils)
RandAdjustContrast (class in monai.transforms.transforms)
RandAdjustContrastd (class in monai.transforms.composables)
RandAffine (class in monai.transforms.transforms)
RandAffined (class in monai.transforms.composables)
RandAffineGrid (class in monai.transforms.transforms)
RandCropByPosNegLabeld (class in monai.transforms.composables)
RandDeformGrid (class in monai.transforms.transforms)
RandFlip (class in monai.transforms.transforms)
RandFlipd (class in monai.transforms.composables)
RandGaussianNoise (class in monai.transforms.transforms)
RandGaussianNoised (class in monai.transforms.composables)
Randomizable (class in monai.transforms.compose)
randomize() (Compose method)
(Rand2DElastic method)
(Rand2DElasticd method)
(Rand3DElastic method)
(Rand3DElasticd method)
(RandAdjustContrast method)
(RandAdjustContrastd method)
(RandAffine method)
(RandAffined method)
(RandAffineGrid method)
(RandCropByPosNegLabeld method)
(RandDeformGrid method)
(RandFlip method)
(RandFlipd method)
(RandGaussianNoise method)
(RandGaussianNoised method)
(Randomizable method)
(RandRotate method)
(RandRotate90 method)
(RandRotate90d method)
(RandRotated method)
(RandScaleIntensity method)
(RandScaleIntensityd method)
(RandShiftIntensity method)
(RandShiftIntensityd method)
(RandSpatialCrop method)
(RandSpatialCropd method)
(RandZoom method)
(RandZoomd method)
RandRotate (class in monai.transforms.transforms)
RandRotate90 (class in monai.transforms.transforms)
RandRotate90d (class in monai.transforms.composables)
RandRotated (class in monai.transforms.composables)
RandScaleIntensity (class in monai.transforms.transforms)
RandScaleIntensityd (class in monai.transforms.composables)
RandShiftIntensity (class in monai.transforms.transforms)
RandShiftIntensityd (class in monai.transforms.composables)
RandSpatialCrop (class in monai.transforms.transforms)
RandSpatialCropd (class in monai.transforms.composables)
RandZoom (class in monai.transforms.transforms)
RandZoomd (class in monai.transforms.composables)
rectify_header_sform_qform() (in module monai.data.utils)
RepeatChannel (class in monai.transforms.transforms)
RepeatChanneld (class in monai.transforms.composables)
Resample (class in monai.transforms.transforms)
rescale_array() (in module monai.transforms.utils)
rescale_array_int_max() (in module monai.transforms.utils)
rescale_instance_array() (in module monai.transforms.utils)
reset() (MeanDice method)
(ROCAUC method)
ResidualUnit (class in monai.networks.blocks.convolutions)
Resize (class in monai.transforms.transforms)
resize_center() (in module monai.transforms.utils)
Resized (class in monai.transforms.composables)
resolve_name() (in module monai.utils.aliases)
ROCAUC (class in monai.handlers.roc_auc)
Rotate (class in monai.transforms.transforms)
Rotate90 (class in monai.transforms.transforms)
Rotate90d (class in monai.transforms.composables)
Rotated (class in monai.transforms.composables)
S
save() (NiftiSaver method)
save_batch() (NiftiSaver method)
ScaleIntensity (class in monai.transforms.transforms)
ScaleIntensityd (class in monai.transforms.composables)
ScaleIntensityRange (class in monai.transforms.transforms)
ScaleIntensityRanged (class in monai.transforms.composables)
SegmentationSaver (class in monai.handlers.segmentation_saver)
set_random_state() (Compose method)
(Rand2DElastic method)
(Rand2DElasticd method)
(Rand3DElastic method)
(Rand3DElasticd method)
(RandAffine method)
(RandAffined method)
(Randomizable method)
set_visible_devices() (in module monai.config.deviceconfig)
ShiftIntensity (class in monai.transforms.transforms)
ShiftIntensityd (class in monai.transforms.composables)
SkipConnection (class in monai.networks.layers.simplelayers)
slice_channels() (in module monai.networks.utils)
sliding_window_inference() (in module monai.data.sliding_window_inference)
Spacing (class in monai.transforms.transforms)
Spacingd (class in monai.transforms.composables)
SpatialCrop (class in monai.transforms.transforms)
SpatialCropd (class in monai.transforms.composables)
SpatialPad (class in monai.transforms.transforms)
SpatialPadd (class in monai.transforms.composables)
StatsHandler (class in monai.handlers.stats_handler)
T
TensorBoardImageHandler (class in monai.handlers.tensorboard_handlers)
TensorBoardStatsHandler (class in monai.handlers.tensorboard_handlers)
ThresholdIntensity (class in monai.transforms.transforms)
ThresholdIntensityd (class in monai.transforms.composables)
to_affine_nd() (in module monai.data.utils)
to_kwargs() (adaptors method)
ToTensor (class in monai.transforms.transforms)
ToTensord (class in monai.transforms.composables)
Transform (class in monai.transforms.compose)
Transpose (class in monai.transforms.transforms)
U
UNet (class in monai.networks.nets.unet)
Unet (in module monai.networks.nets.unet)
unet (in module monai.networks.nets.unet)
update() (MeanDice method)
(ROCAUC method)
W
write_nifti() (in module monai.data.nifti_writer)
Z
zero_margins() (in module monai.transforms.utils)
Zoom (class in monai.transforms.transforms)
zoom_affine() (in module monai.data.utils)
Zoomd (class in monai.transforms.composables)
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